Motif View

Internal ID 17656583
Source Database TransTermHP TERM 1531
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1531
Sequence GGGTAGCCTGTGGGCTACCC
Look for more occurrences
Start 6247756
End 6247775
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAAAACGAAAAAA(5' tail) GGGTAGCC(5' stem) CACA(loop) GGCTACCC(3' stem) TTTTCCCTGACACCG(3' tail). Confidence: 100. opp_overlap 6247756, overlap 6247749

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685