Motif View

Internal ID 17656643
Source Database TransTermHP TERM 95
Feature Type terminator
Name
Rho-independent transcription terminator TERM 95
Sequence CGCAGCCGCCGGCGCCGCCCCCGGGCGGCGTCGGCACGGCG
Look for more occurrences
Start 443554
End 443594
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGCCGGACGAAA(5' tail) CGCCG-TGCCGACGCCGCC(5' stem) CGGG(loop) GGCGGCGCCGGCGGCTGCG(3' stem) GCTCAGAGGCCCAGG(3' tail). Confidence: 100. gap 1, opp_overlap 443586

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685