Motif View

Internal ID 17656676
Source Database TransTermHP TERM 144
Feature Type terminator
Name
Rho-independent transcription terminator TERM 144
Sequence GGCGGATGACGCAAACGCCATCCGCC
Look for more occurrences
Start 685306
End 685331
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGAAGAAAAAAA(5' tail) GGCGGATGGCG(5' stem) TTTG(loop) CGTCATCCGCC(3' stem) TTTTTTGTGCTCGGC(3' tail). Confidence: 100. opp_overlap 685306

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685