Motif View

Internal ID 17656683
Source Database TransTermHP TERM 153
Feature Type terminator
Name
Rho-independent transcription terminator TERM 153
Sequence GGCCCGCCATGCGCGGGCG
Look for more occurrences
Start 707731
End 707749
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAACGCCGTAACA(5' tail) GGCCCGC(5' stem) CATGC(loop) GCGGGCG(3' stem) TTTTTTTGCCTGAAG(3' tail). Confidence: 100. opp_overlap 707731, overlap 707732

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685