Motif View

Internal ID 17657194
Source Database TransTermHP TERM 979
Feature Type terminator
Name
Rho-independent transcription terminator TERM 979
Sequence CCGGGCCGCGGGTAACCGCCGCCCGG
Look for more occurrences
Start 4357224
End 4357249
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAACGCATCGTACGA(5' tail) CCGGGCCGCGG(5' stem) GTAA(loop) CCGCCGCCCGG(3' stem) TTTTTTCTTGCCCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685