Motif View

Internal ID 17657195
Source Database TransTermHP TERM 980
Feature Type terminator
Name
Rho-independent transcription terminator TERM 980
Sequence CCCGCCCTCGTGGCGGG
Look for more occurrences
Start 4363121
End 4363137
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAGGCATAAAAAAA(5' tail) CCCGCC(5' stem) ACGAG(loop) GGCGGG(3' stem) TTCGAAGGGCGGCAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685