Internal ID | 17657227 | Source Database | TransTermHP TERM 1036 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1036
|
Sequence |
CAAAAAACCCGCCGTTCGGCGGGTTTTCTG Look for more occurrences |
Start | 4604828 |
End | 4604857 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GACCGCCGCGAAAAA(5' tail) CAGAAAACCCGCC(5' stem) GAAC(loop) GGCGGGTTTTTTG(3' stem) TGCATTCAATAATGG(3' tail). Confidence: 100. opp_overlap 4604828 4604835, overlap 4604835 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|