Motif View

Internal ID 17657241
Source Database TransTermHP TERM 1058
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1058
Sequence GCCGCCCAAGGGCGGC
Look for more occurrences
Start 4654035
End 4654050
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGCCATGAAAAAA(5' tail) GCCGCC(5' stem) CTTG(loop) GGCGGC(3' stem) TTCTTGCATGGCGCT(3' tail). Confidence: 100. opp_overlap 4654035

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685