Motif View

Internal ID 17657263
Source Database TransTermHP TERM 1084
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1084
Sequence GGGCATGGAACTCTATTTCCATGCCC
Look for more occurrences
Start 4729928
End 4729953
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCATTCAGCCGACAA(5' tail) GGGCATGGAA(5' stem) CTCTAT(loop) TTCCATGCCC(3' stem) TTTGTTTTTATCCCG(3' tail). Confidence: 100. opp_overlap 4729928

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685