Motif View

Internal ID 17657268
Source Database TransTermHP TERM 1094
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1094
Sequence GCCCCTGATTTTCTTAGCGAATTTCAGGGGC
Look for more occurrences
Start 4750099
End 4750129
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACGAAAAGAGATAA(5' tail) GCCCCTGATTTTC(5' stem) TTAGC(loop) GAATTTCAGGGGC(3' stem) TTTTTCGTTAAGAGG(3' tail). Confidence: 100. opp_overlap 4750092 4750099

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685