Motif View

Internal ID 17657576
Source Database TransTermHP TERM 1547
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1547
Sequence GACGCGGCCTACGGGCCGCGTC
Look for more occurrences
Start 6376024
End 6376045
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCACCGGCAACAACC(5' tail) GACGCGGCC(5' stem) TACG(loop) GGCCGCGTC(3' stem) TTCGTTGGCGCTATC(3' tail). Confidence: 91. opp_overlap 6376023 6376022 6376026

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685