Motif View

Internal ID 17657592
Source Database TransTermHP TERM 1573
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1573
Sequence GGCCATCTGCGGATGGCC
Look for more occurrences
Start 6500795
End 6500812
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACTTTTTGGTGATA(5' tail) GGCCATC(5' stem) TGCG(loop) GATGGCC(3' stem) TTTTTTTATTCCTCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685