Motif View

Internal ID 17658704
Source Database TransTermHP TERM 430
Feature Type terminator
Name
Rho-independent transcription terminator TERM 430
Sequence GCCGCAACGGGCCATCCTTGGCCCGGTGCGGC
Look for more occurrences
Start 1889472
End 1889503
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGACGCCGAGCAA(5' tail) GCCGCACCGGGCCA(5' stem) AGGA(loop) TGGCCCGTTGCGGC(3' stem) GGCCCCCGGATCAGT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685