| Internal ID | 17659702 | Source Database | TransTermHP TERM 541 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 541
|
| Sequence |
CACAAAGCCCCTGAATTTCTTTCAGAATTCAGGGGCTTTGCG Look for more occurrences |
| Start | 2155096 |
| End | 2155137 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGAAGCGTCAGAAAC(5' tail) CACAAAGCCCCTGAATTTCT(5' stem) TTC(loop) AGA-ATTCAGGGGCTTTGCG(3' stem) TTGTATCGATATGGC(3' tail). Confidence: 100. gap 1, opp_overlap 2155096 2155095 2155098 2155102, overlap 2155102 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|