Motif View

Internal ID 17659996
Source Database TransTermHP TERM 973
Feature Type terminator
Name
Rho-independent transcription terminator TERM 973
Sequence GCCCCGCACTGCAAAGGCGGGGC
Look for more occurrences
Start 4355280
End 4355302
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACCGCAAGCCGAAA(5' tail) GCCCCGCACT(5' stem) GCAA(loop) AG-GCGGGGC(3' stem) TTTTTTTATGCGCGC(3' tail). Confidence: 100. gap 1, opp_overlap 4355280

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685