| Internal ID | 17661962 | Source Database | TransTermHP TERM 1161 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1161
|
| Sequence |
CCAATAAAAAACCCGCATCTGCGGGTTTTTTATTGG Look for more occurrences |
| Start | 5129767 |
| End | 5129802 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCGCGCAGTTTCAAA(5' tail) CCAATAAAAAACCCGC(5' stem) AGAT(loop) GCGGGTTTTTTATTGG(3' stem) CTAATGAATAGGCTT(3' tail). Confidence: 100. opp_overlap 5129771 5129778, overlap 5129778 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|