Internal ID | 17661964 | Source Database | TransTermHP TERM 1164 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1164
|
Sequence |
CCCGCAGATGCGGG Look for more occurrences |
Start | 5129778 |
End | 5129791 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CAAACCAATAAAAAA(5' tail) CCCGC(5' stem) AGAT(loop) GCGGG(3' stem) TTTTTTATTGGCTAA(3' tail). Confidence: 100. opp_overlap 5129778 5129767, overlap 5129771 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|