Motif View

Internal ID 17667023
Source Database TransTermHP TERM 1894
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1894
Sequence TCGTTCCCACGCTGAGCGTGGGAACGA
Look for more occurrences
Start 5956918
End 5956944
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGTCCACCTAACGA(5' tail) TCGTTCCCACGC(5' stem) TCA(loop) GCGTGGGAACGA(3' stem) GCTTCAGAACCTAGC(3' tail). Confidence: 100. overlap 5956915

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685