Motif View

Internal ID 17672549
Source Database TransTermHP TERM 975
Feature Type terminator
Name
Rho-independent transcription terminator TERM 975
Sequence GCCCCGCCTCTTTGCAGAGTGCGGGGC
Look for more occurrences
Start 5113676
End 5113702
Strand -
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTGAAGCGAAAAAA(5' tail) GCCCCGCACTCT(5' stem) GCAA(loop) AGAG-GCGGGGC(3' stem) TTTTTCGTGGCTGAC(3' tail). Confidence: 100. gap 1, opp_overlap 5113676

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685