Motif View

Internal ID 17678217
Source Database TransTermHP TERM 994
Feature Type terminator
Name
Rho-independent transcription terminator TERM 994
Sequence CGCAACGCGCCCCCATCGGGGCGCGCTTGCG
Look for more occurrences
Start 4424120
End 4424150
Strand -
Genomic Context
Replicon Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTTCCTTGATGAA(5' tail) CGCAAGCGCGCCCC(5' stem) GATG(loop) GGGGCGCG-TTGCG(3' stem) GATGACGGTAAGTGA(3' tail). Confidence: 91. gap 1, overlap 4424125

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685