Motif View

Internal ID 17678851
Source Database TransTermHP TERM 991
Feature Type terminator
Name
Rho-independent transcription terminator TERM 991
Sequence CGCAACGCGCCCCCATCGGGGCGCGCTTGCG
Look for more occurrences
Start 4586150
End 4586180
Strand -
Genomic Context
Replicon Pseudomonas stutzeri DSM 4166 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTTCCTTGATGAA(5' tail) CGCAAGCGCGCCCC(5' stem) GATG(loop) GGGGCGCG-TTGCG(3' stem) GATGACGGTGAGTGA(3' tail). Confidence: 91. gap 1, overlap 4586155

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685