Motif View

Internal ID 17679676
Source Database TransTermHP TERM 267
Feature Type terminator
Name
Rho-independent transcription terminator TERM 267
Sequence TCTGTCGAGCGTGGCGCGTCAGACGATTTGTCGCGGCACGTTCGTCACA
Look for more occurrences
Start 1342633
End 1342681
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACTAGGGCCGCGCGC(5' tail) TCTGTCGAGCGTGGCGCGTCAGA(5' stem) CGA(loop) TTTGTCGCGGCACGTTCGTCACA(3' stem) TTTTCCTCGATTGAA(3' tail). Confidence: 93. overlap 1342630 1342629 1342635

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685