| Internal ID | 17681140 | Source Database | TransTermHP TERM 431 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 431
|
| Sequence |
GGACTGCGGAGGGAGGTGACGGGCATCGATGCCCGTCACCTCCCTCCGCAAGACC Look for more occurrences |
| Start | 1441142 |
| End | 1441196 |
| Strand | + |
| Genomic Context | Located within gene [B479_06470] |
| Replicon | Pseudomonas putida HB3267, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGAGGCCGAGCGAAG(5' tail) GGAC-TGCGGAGGGAGGTGACGGGCA(5' stem) TCGA(loop) TGCCCGTCACCTCCCTCCGCAAGACC(3' stem) TCTGCTCGGCCTCCT(3' tail). Confidence: 100. gap 1, opp_overlap 1441141 1441145 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|