Motif View

Internal ID 17683369
Source Database TransTermHP TERM 940
Feature Type terminator
Name
Rho-independent transcription terminator TERM 940
Sequence GCCGGGCATTGCCCGGC
Look for more occurrences
Start 4127956
End 4127972
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCCAACGAAGAA(5' tail) GCCGGGC(5' stem) ATT(loop) GCCCGGC(3' stem) TTTTTCATGCCTGCT(3' tail). Confidence: 100. opp_overlap 4127956

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685