Motif View

Internal ID 17689294
Source Database TransTermHP TERM 1226
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1226
Sequence GCGTCGCTCCGCTGGACGGCTGC
Look for more occurrences
Start 4017265
End 4017287
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCATACACTTTTCA(5' tail) GC-GTCGCTCC(5' stem) GCT(loop) GGA-CGGCTGC(3' stem) TTTTTTTCGTTACCC(3' tail). Confidence: 95. overlap 4017267

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685