Motif View

Internal ID 17689305
Source Database TransTermHP TERM 1237
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1237
Sequence GCCGGGCAATGCCCGGC
Look for more occurrences
Start 4034568
End 4034584
Strand -
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCAAGAGCAAAAAA(5' tail) GCCGGGC(5' stem) ATT(loop) GCCCGGC(3' stem) TTTTCTTTGCCTTGA(3' tail). Confidence: 100. opp_overlap 4034568 4034563

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685