Pseudomonas aeruginosa PAK

Strain Overview
Organism Name Pseudomonas aeruginosa PAK - Assembly GCF_000568855.2
Species Pseudomonas aeruginosa
Strain PAK
Description/Title Pseudomonas aeruginosa PAK genome sequence
Annotated Genes 5564
Partial Genes 96
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Geographic Location
Sample Provider
Name Peter Jorth
E-mail pjorth@gmail.com
Institution University of Texas at Austin
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 693
nuoD
4		 acsA
11		 ppsA
4		 mutL
11		 aroE
5		 trpE
14		 guaA
11
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000568855.2
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02483603
NCBI Taxonomy ID 1009714
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa PAK chromosome, complete genome.

Annotated Features

Feature Count
gene 5564
CDS 5500
pseudo 444
tRNA 57
rRNA 3
ncRNA 3
tmRNA 1

Replicons

Name Length GC
Pseudomonas aeruginosa PAK chromosome, complete genome. 6283316 bp 66.3%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF