Pseudomonas aeruginosa PAO1, PA0475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0475
Name
Replicon chromosome
Genomic location 535539 - 536108 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 19 transposon mutants in orthologs

Cross-References

RefSeq NP_249166.1
GI 15595672
Affymetrix PA0475_at
DNASU PaCD00006197
Entrez 879516
GenBank AAG03864.1
INSDC AAG03864.1
NCBI Locus Tag PA0475
protein_id(GenBank) gb|AAG03864.1|AE004485_5|gnl|PseudoCAP|PA0475
TIGR NTL03PA00476
UniParc UPI00000C5078
UniProtKB Acc Q9I643
UniProtKB ID Q9I643_PSEAE
UniRef100 UniRef100_W0YKJ7
UniRef50 UniRef50_A6UYU1
UniRef90 UniRef90_W0YKJ7

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 0.38
Kyte-Doolittle Hydrophobicity Value 0.050
Molecular Weight (kDa) 20.3
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 145 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6139 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0475

References

No references are associated with this feature.