Pseudomonas aeruginosa PAO1, PA0962 (dps)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0962
Name
dps
Replicon chromosome
Genomic location 1047549 - 1048019 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249653.1
GI 15596159
Affymetrix PA0962_at
Entrez 881882
GenBank AAG04351.1
INSDC AAG04351.1
NCBI Locus Tag PA0962
protein_id(GenBank) gb|AAG04351.1|AE004530_4|gnl|PseudoCAP|PA0962
TIGR NTL03PA00963
UniParc UPI00000C51E1
UniProtKB Acc Q9I4Z7
UniProtKB ID Q9I4Z7_PSEAE
UniRef100 UniRef100_W0YMY0
UniRef50 UniRef50_Q2L0H0
UniRef90 UniRef90_L8MEK7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding protein from starved cells, Dps
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Verified using two-dimensional gel electrophoresis, MALDI-TOF MS and peptide mass mapping(pI:5.0, molecular weight:17.5, PMID:21674802)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.04
Kyte-Doolittle Hydrophobicity Value -0.123
Molecular Weight (kDa) 17.5
Isoelectric Point (pI) 4.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 381 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000927 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0962
Search term: dps

References

Metalloregulation in Bacillus subtilis: isolation and characterization of two genes differentially repressed by metal ions.
Chen L, James LP, Helmann JD
J. Bacteriol. 1993 Sep;175(17):5428-37
PubMed ID: 8396117
First steps from a two-dimensional protein index towards a response-regulation map for Bacillus subtilis.
Antelmann H, Bernhardt J, Schmid R, Mach H, Völker U, Hecker M
Electrophoresis 1997 Aug;18(8):1451-63
PubMed ID: 9298659
Proteomics of the oxidative stress response induced by hydrogen peroxide and paraquat reveals a novel AhpC-like protein in Pseudomonas aeruginosa.
Hare NJ, Scott NE, Shin EH, Connolly AM, Larsen MR, Palmisano G, Cordwell SJ
Proteomics 2011 Aug;11(15):3056-69
PubMed ID: 21674802
A proteome analysis of the response of a Pseudomonas aeruginosa oxyR mutant to iron limitation.
Vinckx T, Wei Q, Matthijs S, Noben JP, Daniels R, Cornelis P
Biometals 2011 Jun;24(3):523-32
PubMed ID: 21207115