Pseudomonas aeruginosa UCBPP-PA14, PA14_20260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_20260
Name
Replicon chromosome
Genomic location 1745467 - 1746162 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789761.1
GI 116051406
Entrez 4381352
INSDC ABJ12642.1
NCBI Locus Tag PA14_20260
UniParc UPI0000396085
UniProtKB Acc Q02QM5
UniProtKB ID Q02QM5_PSEAB
UniRef100 UniRef100_Q02QM5
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_Q9RPT0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.86
Kyte-Doolittle Hydrophobicity Value -0.329
Molecular Weight (kDa) 26.0
Isoelectric Point (pI) 7.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7BU1 TRANSFERASE 04/03/20 Crystal structure of TrmO from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.49 X-RAY DIFFRACTION 99.1
7BTZ TRANSFERASE 04/03/20 Crystal structure of TrmO Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 99.1
7BTU TRANSFERASE 04/03/20 Crystal structure of TrmO from P. areuginosa Pseudomonas aeruginosa 1.91 X-RAY DIFFRACTION 99.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 243 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_20260

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 6.6e-31
Percent Identity: 46.9

References

No references are associated with this feature.