Pseudomonas aeruginosa UCBPP-PA14, PA14_23330 (rpsA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_23330
Name
rpsA
Replicon chromosome
Genomic location 2024157 - 2025836 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_790018.1
GI 116051151
Entrez 4381155
INSDC ABJ12387.1
NCBI Locus Tag PA14_23330
UniParc UPI00000C5930
UniProtKB Acc Q02PW8
UniProtKB ID Q02PW8_PSEAB
UniRef100 UniRef100_Q9HZ71
UniRef50 UniRef50_P0AG69
UniRef90 UniRef90_Q9HZ71

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S1
Synonyms
Evidence for Translation
Charge (pH 7) -30.82
Kyte-Doolittle Hydrophobicity Value -0.343
Molecular Weight (kDa) 61.9
Isoelectric Point (pI) 4.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 598 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002453 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_23330
Search term: rpsA

Human Homologs

Ensembl 110, assembly GRCh38.p14
zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246]
E-value: 1.9e-07
Percent Identity: 38.0

References

No references are associated with this feature.