Pseudomonas aeruginosa UCBPP-PA14, PA14_30580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_30580
Name
Replicon chromosome
Genomic location 2647547 - 2648353 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_790603.1
GI 116050578
Entrez 4380622
INSDC ABJ11814.1
NCBI Locus Tag PA14_30580
UniParc UPI0000E44A3E
UniProtKB Acc Q02N83
UniProtKB ID Q02N83_PSEAB
UniRef100 UniRef100_W1MJM5
UniRef50 UniRef50_A6V4I6
UniRef90 UniRef90_W0YT10

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -10.13
Kyte-Doolittle Hydrophobicity Value -0.067
Molecular Weight (kDa) 30.6
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5XHX TRANSCRIPTION 04/24/17 Crystal structure of VqsR LBD domain from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 98.4

Virulence Evidence

Source 1
Database PseudoCAP
Category
Evidence ECO:0000015
mutant phenotype evidence
Host Organism Caenorhabditis elegans
Notes
Infection model C. elegans slow killing assay.
Reference 22911607

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002957 (304 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_30580

Human Homologs

References

No references are associated with this feature.