Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2619
|
Name |
infA
|
Replicon | chromosome |
Genomic location | 2962003 - 2962221 (+ strand) |
RefSeq | NP_251309.1 |
GI | 15597815 |
Affymetrix | PA2619_infA_at |
DNASU | PaCD00007130 |
Entrez | 882325 |
GenBank | AAG06007.1 |
INSDC | AAG06007.1 |
NCBI Locus Tag | PA2619 |
protein_id(GenBank) | gb|AAG06007.1|AE004690_7|gnl|PseudoCAP|PA2619 |
TIGR | NTL03PA02619 |
UniParc | UPI000000F8CE |
UniProtKB Acc | P65116 |
UniProtKB ID | IF1_PSEAE |
UniRef100 | UniRef100_Q48H67 |
UniRef50 | UniRef50_Q48H67 |
UniRef90 | UniRef90_Q48H67 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
initiation factor
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 2.46 |
Kyte-Doolittle Hydrophobicity Value | -0.512 |
Molecular Weight (kDa) | 8.3 |
Isoelectric Point (pI) | 9.63 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2N78 | TRANSLATION | 09/04/15 | NMR structure of IF1 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | NOT | SOLUTION NMR | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002933 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2619
Search term: infA
Search term: initiation factor
|
Cloning and mapping of infA, the gene for protein synthesis initiation factor IF1.
Sands JF, Cummings HS, Sacerdot C, Dondon L, Grunberg-Manago M, Hershey JW
Nucleic Acids Res 1987 Jul 10;15(13):5157-68
PubMed ID: 3037488
|
The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif.
Sette M, van Tilborg P, Spurio R, Kaptein R, Paci M, Gualerzi CO, Boelens R
EMBO J 1997 Mar 17;16(6):1436-43
PubMed ID: 9135158
|
The complete genome sequence of Escherichia coli K-12.
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y
Science 1997 Sep 5;277(5331):1453-62
PubMed ID: 9278503
|
Initiation factors IF1 and IF2 synergistically remove peptidyl-tRNAs with short polypeptides from the P-site of translating Escherichia coli ribosomes.
Karimi R, Pavlov MY, Heurgué-Hamard V, Buckingham RH, Ehrenberg M
J Mol Biol 1998 Aug 14;281(2):241-52
PubMed ID: 9698545
|