Pseudomonas aeruginosa PAO1, PA2879

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2879
Name
Synonym: hpkR
Replicon chromosome
Genomic location 3231882 - 3232772 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_251569.1
GI 15598075
Affymetrix PA2879_at
Entrez 882675
GenBank AAG06267.1
INSDC AAG06267.1
NCBI Locus Tag PA2879
protein_id(GenBank) gb|AAG06267.1|AE004714_4|gnl|PseudoCAP|PA2879
TIGR NTL03PA02879
UniParc UPI00000C585A
UniProtKB Acc Q9HZW8
UniProtKB ID Q9HZW8_PSEAE
UniRef100 UniRef100_A0A0A8RDA0
UniRef50 UniRef50_D4X7D8
UniRef90 UniRef90_W0YUM0

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.85
Kyte-Doolittle Hydrophobicity Value -0.144
Molecular Weight (kDa) 32.4
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 484 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002693 (937 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2879

Human Homologs

References

No references are associated with this feature.