Pseudomonas aeruginosa PAO1, PA3123

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3123
Name
Replicon chromosome
Genomic location 3505865 - 3506242 (- strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251813.1
GI 15598319
Affymetrix PA3123_at
Entrez 878816
GenBank AAG06511.1
INSDC AAG06511.1
NCBI Locus Tag PA3123
protein_id(GenBank) gb|AAG06511.1|AE004736_8|gnl|PseudoCAP|PA3123
TIGR NTL03PA03123
UniParc UPI00000C5918
UniProtKB Acc Q9HZA1
UniProtKB ID Q9HZA1_PSEAE
UniRef100 UniRef100_Q9HZA1
UniRef50 UniRef50_M4X2F4
UniRef90 UniRef90_Q9HZA1

Product

Feature Type CDS
Coding Frame 1
Product Name
RidA subfamily protein
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.56
Kyte-Doolittle Hydrophobicity Value 0.083
Molecular Weight (kDa) 13.5
Isoelectric Point (pI) 4.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 527 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002475 (350 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3123

Human Homologs

References

PA5339, a RidA Homolog, Is Required for Full Growth in Pseudomonas aeruginosa.
Irons J, Hodge-Hanson KM, Downs DM
J Bacteriol 2018 Nov 15;200(22)
PubMed ID: 30181125