Pseudomonas aeruginosa PAO1, PA3927

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3927
Name
Replicon chromosome
Genomic location 4402638 - 4403426 (+ strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_252616.1
GI 15599122
Affymetrix PA3927_at
DNASU PaCD00007712
Entrez 879065
GenBank AAG07314.1
INSDC AAG07314.1
NCBI Locus Tag PA3927
protein_id(GenBank) gb|AAG07314.1|AE004810_6|gnl|PseudoCAP|PA3927
TIGR NTL03PA03927
UniParc UPI00000C5B7E
UniProtKB Acc Q9HX87
UniProtKB ID Q9HX87_PSEAE
UniRef100 UniRef100_U8NNF0
UniRef50 UniRef50_Q4K6D5
UniRef90 UniRef90_A6V0I0

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 3.52
Kyte-Doolittle Hydrophobicity Value -0.169
Molecular Weight (kDa) 30.0
Isoelectric Point (pI) 8.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 190 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000764 (1419 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3927

Human Homologs

References

No references are associated with this feature.