Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4257
|
Name |
rpsC
|
Replicon | chromosome |
Genomic location | 4763544 - 4764230 (- strand) |
RefSeq | NP_252947.1 |
GI | 15599453 |
Affymetrix | PA4257_rpsC_at |
Entrez | 881761 |
GenBank | AAG07645.1 |
INSDC | AAG07645.1 |
NCBI Locus Tag | PA4257 |
protein_id(GenBank) | gb|AAG07645.1|AE004841_23|gnl|PseudoCAP|PA4257 |
TIGR | NTL03PA04258 |
UniParc | UPI0000134FA0 |
UniProtKB Acc | Q9HWE1 |
UniProtKB ID | RS3_PSEAE |
UniRef100 | UniRef100_A6UZJ4 |
UniRef50 | UniRef50_A0LIJ6 |
UniRef90 | UniRef90_A4XZ84 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
30S ribosomal protein S3
|
Synonyms | |
Evidence for Translation |
Detected using LC-MS/MS (25.84 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 18.68 |
Kyte-Doolittle Hydrophobicity Value | -0.450 |
Molecular Weight (kDa) | 25.8 |
Isoelectric Point (pI) | 10.76 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
6SPC | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.95 | ELECTRON MICROSCOPY | 100.0 |
6SPE | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.6 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001453 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4257
Search term: rpsC
Search term: 30S ribosomal protein S3
|
The primary structure of protein S3 from the small ribosomal subunit of Escherichia coli.
Brauer D, Röming R
FEBS Lett 1979 Oct 15;106(2):352-7
PubMed ID: 387449
|
Structure of the Escherichia coli S10 ribosomal protein operon.
Zurawski G, Zurawski SM
Nucleic Acids Res 1985 Jun 25;13(12):4521-6
PubMed ID: 3892488
|
The histone-like H protein of Escherichia coli is ribosomal protein S3.
Bruckner RC, Cox MM
Nucleic Acids Res 1989 Apr 25;17(8):3145-61
PubMed ID: 2657655
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|