Pseudomonas aeruginosa PAO1, PA4538 (ndh)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA4538
Name
ndh
Replicon chromosome
Genomic location 5077770 - 5079077 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253228.1
GI 15599734
Affymetrix PA4538_ndh_at
Entrez 878460
GenBank AAG07926.1
INSDC AAG07926.1
NCBI Locus Tag PA4538
protein_id(GenBank) gb|AAG07926.1|AE004867_12|gnl|PseudoCAP|PA4538
TIGR NTL03PA04539
UniParc UPI00000C5D59
UniProtKB Acc Q9HVN9
UniProtKB ID Q9HVN9_PSEAE
UniRef100 UniRef100_W0Z586
UniRef50 UniRef50_C5ATR0
UniRef90 UniRef90_A6VBS4

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 5.76
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 47.4
Isoelectric Point (pI) 8.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004118 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4538
Search term: ndh

References

In vitro synthesis of the respiratory NADH dehydrogenase of Escherichia coli. Role of UUG as initiation codon.
Poulis MI, Shaw DC, Campbell HD, Young IG
Biochemistry 1981 Jul 7;20(14):4178-85
PubMed ID: 7025892