Pseudomonas aeruginosa PAO1, PA4880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4880
Name
Replicon chromosome
Genomic location 5476945 - 5477478 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253567.1
GI 15600073
Affymetrix PA4880_at
DNASU PaCD00008113
Entrez 882911
GenBank AAG08265.1
INSDC AAG08265.1
NCBI Locus Tag PA4880
protein_id(GenBank) gb|AAG08265.1|AE004901_7|gnl|PseudoCAP|PA4880
TIGR NTL03PA04881
UniParc UPI00000C5E56
UniProtKB Acc Q9HUT3
UniProtKB ID Q9HUT3_PSEAE
UniRef100 UniRef100_W0Z0W0
UniRef50 UniRef50_W0Z0W0
UniRef90 UniRef90_W0Z0W0

Product

Feature Type CDS
Coding Frame 1
Product Name
probable bacterioferritin
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Detected by two-dimensional gel electrophoresis and mass spectral analysis(PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -14.82
Kyte-Doolittle Hydrophobicity Value -0.489
Molecular Weight (kDa) 20.2
Isoelectric Point (pI) 4.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 1
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 224 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004508 (482 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4880

Human Homologs

References

Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142