Pseudomonas aeruginosa PAO1, PA5467

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5467
Name
Replicon chromosome
Genomic location 6156212 - 6156574 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_254154.1
GI 15600660
Affymetrix PA5467_at
DNASU PaCD00008356
Entrez 879738
GenBank AAG08852.1
INSDC AAG08852.1
NCBI Locus Tag PA5467
protein_id(GenBank) gb|AAG08852.1|AE004959_8|gnl|PseudoCAP|PA5467
TIGR NTL03PA05468
UniParc UPI00000C6020
UniProtKB Acc Q9HTA3
UniProtKB ID Q9HTA3_PSEAE
UniRef100 UniRef100_W0Z0T5
UniRef50 UniRef50_W0Z0T5
UniRef90 UniRef90_W0Z0T5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -6.08
Kyte-Doolittle Hydrophobicity Value 0.289
Molecular Weight (kDa) 12.5
Isoelectric Point (pI) 4.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005010 (304 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5467

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295