Pseudomonas aeruginosa PAO1, PA5472

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5472
Name
Replicon chromosome
Genomic location 6161067 - 6161867 (- strand)
Transposon Mutants 18 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254159.1
GI 15600665
Affymetrix PA5472_at
DNASU PaCD00008357
Entrez 877633
GenBank AAG08857.1
INSDC AAG08857.1
NCBI Locus Tag PA5472
protein_id(GenBank) gb|AAG08857.1|AE004959_13|gnl|PseudoCAP|PA5472
TIGR NTL03PA05473
UniParc UPI00000C6025
UniProtKB Acc Q9HT98
UniProtKB ID Q9HT98_PSEAE
UniRef100 UniRef100_Q9HT98
UniRef50 UniRef50_Q9HT98
UniRef90 UniRef90_Q9HT98

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Detected by MALDI-TOF/TOF (PMID:19333994).
Charge (pH 7) -4.89
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 29.1
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005014 (302 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5472

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994