Pseudomonas aeruginosa PAO1, PA0376 (rpoH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0376
Name
rpoH
Replicon chromosome
Genomic location 420683 - 421537 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_249067.1
GI 15595573
Affymetrix PA0376_rpoH_at
Entrez 883126
GenBank AAG03765.1
INSDC AAG03765.1
NCBI Locus Tag PA0376
protein_id(GenBank) gb|AAG03765.1|AE004475_7|gnl|PseudoCAP|PA0376
TIGR NTL03PA00377
UniParc UPI0000134566
UniProtKB Acc P42378
UniProtKB ID RPOH_PSEAE
UniRef100 UniRef100_P42378
UniRef50 UniRef50_P11539
UniRef90 UniRef90_P42378

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma factor RpoH
Product Name Confidence: Class 1
Synonyms heat-shock sigma factor
Evidence for Translation
Charge (pH 7) -3.34
Kyte-Doolittle Hydrophobicity Value -0.510
Molecular Weight (kDa) 32.6
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000367 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0376
Search term: rpoH
Search term: sigma factor RpoH

References

Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa.
Benvenisti L, Koby S, Rutman A, Giladi H, Yura T, Oppenheim AB
Gene 1995 Mar;155(1):73-6
PubMed ID: 7698670