Pseudomonas aeruginosa PAO1, PA0550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0550
Name
Synonym: ygbM
Replicon chromosome
Genomic location 609202 - 609999 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_249241.1
GI 15595747
Affymetrix PA0550_at
DNASU PaCD00006237
Entrez 879239
GenBank AAG03939.1
INSDC AAG03939.1
NCBI Locus Tag PA0550
protein_id(GenBank) gb|AAG03939.1|AE004491_6|gnl|PseudoCAP|PA0550
TIGR NTL03PA00551
UniParc UPI00000C50AD
UniProtKB Acc Q9I5Y6
UniProtKB ID Q9I5Y6_PSEAE
UniRef100 UniRef100_Q9I5Y6
UniRef50 UniRef50_Q44015
UniRef90 UniRef90_Q02TL5

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.95
Kyte-Doolittle Hydrophobicity Value -0.430
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 209 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000534 (890 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0550

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxypyruvate isomerase (putative) [Source:HGNC Symbol;Acc:HGNC:26948]
E-value: 4.9e-63
Percent Identity: 48.1

References

No references are associated with this feature.