Pseudomonas aeruginosa PAO1, PA0563

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0563
Name
Replicon chromosome
Genomic location 620135 - 620488 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249254.1
GI 15595760
Affymetrix PA0563_at
DNASU PaCD00006244
Entrez 879219
GenBank AAG03952.1
INSDC AAG03952.1
NCBI Locus Tag PA0563
protein_id(GenBank) gb|AAG03952.1|AE004492_11|gnl|PseudoCAP|PA0563
TIGR NTL03PA00564
UniParc UPI00000C50B8
UniProtKB Acc Q9I5X3
UniProtKB ID Q9I5X3_PSEAE
UniRef100 UniRef100_W0YLY7
UniRef50 UniRef50_Q8KC46
UniRef90 UniRef90_W0YLY7

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 4.43
Kyte-Doolittle Hydrophobicity Value 0.426
Molecular Weight (kDa) 13.3
Isoelectric Point (pI) 9.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 158 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000547 (324 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0563

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295