Pseudomonas aeruginosa PAO1, PA0625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0625
Name
Replicon chromosome
Genomic location 683599 - 685836 (+ strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249316.1
GI 15595822
Affymetrix PA0625_at
Entrez 880716
GenBank AAG04014.1
INSDC AAG04014.1
NCBI Locus Tag PA0625
protein_id(GenBank) gb|AAG04014.1|AE004498_9|gnl|PseudoCAP|PA0625
TIGR NTL03PA00626
UniParc UPI00000D4280
UniProtKB Acc G3XD83
UniProtKB ID G3XD83_PSEAE
UniRef100 UniRef100_G3XD83
UniRef50 UniRef50_A6UZC9
UniRef90 UniRef90_B7V4L0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (77.65 kDa, PMID:21751344)
Charge (pH 7) 11.76
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 77.6
Isoelectric Point (pI) 10.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Vesicle Class 1
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 8 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000608 (311 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0625

References

Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344