Pseudomonas aeruginosa PAO1, PA5154

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5154
Name
Replicon chromosome
Genomic location 5802129 - 5802824 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_253841.1
GI 15600347
Affymetrix PA5154_at
DNASU PaCD00008218
Entrez 879970
GenBank AAG08539.1
INSDC AAG08539.1
NCBI Locus Tag PA5154
protein_id(GenBank) gb|AAG08539.1|AE004928_5|gnl|PseudoCAP|PA5154
TIGR NTL03PA05155
UniParc UPI00000C5F2C
UniProtKB Acc Q9HU30
UniProtKB ID Q9HU30_PSEAE
UniRef100 UniRef100_W0YZV3
UniRef50 UniRef50_I3TQ89
UniRef90 UniRef90_W0YZV3

Product

Feature Type CDS
Coding Frame 1
Product Name
probable permease of ABC transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 7.64
Kyte-Doolittle Hydrophobicity Value 0.696
Molecular Weight (kDa) 24.9
Isoelectric Point (pI) 10.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Cytoplasmic Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000856 (1029 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5154

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Opine transport genes in the octopine (occ) and nopaline (noc) catabolic regions in Ti plasmids of Agrobacterium tumefaciens.
Zanker H, von Lintig J, Schröder J
J Bacteriol 1992 Feb;174(3):841-9
PubMed ID: 1732218