Pseudomonas aeruginosa PAO1, PA5500 (znuC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5500
Name
znuC
Synonym: yebM
Replicon chromosome
Genomic location 6192682 - 6193491 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254187.1
GI 15600693
Affymetrix PA5500_znuC_at
DNASU PaCD00008370
Entrez 877853
GenBank AAG08885.1
INSDC AAG08885.1
NCBI Locus Tag PA5500
protein_id(GenBank) gb|AAG08885.1|AE004962_9|gnl|PseudoCAP|PA5500
TIGR NTL03PA05501
UniParc UPI00000C603B
UniProtKB Acc Q9HT73
UniProtKB ID ZNUC_PSEAE
UniRef100 UniRef100_Q02DK9
UniRef50 UniRef50_Q9KQB8
UniRef90 UniRef90_Q02DK9

Product

Feature Type CDS
Coding Frame 1
Product Name
zinc transport protein ZnuC
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 4.93
Kyte-Doolittle Hydrophobicity Value 0.019
Molecular Weight (kDa) 29.2
Isoelectric Point (pI) 8.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 2
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005039 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5500
Search term: znuC

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36]
E-value: 5.4e-17
Percent Identity: 28.2

References

No references are associated with this feature.