Pseudomonas fluorescens F113, PSF113_0042

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0042
Name
Replicon chromosome
Genomic location 44423 - 46510 (+ strand)

Cross-References

RefSeq YP_005205472.1
GI 378947984
EC Number 3.5.1.28
Entrez 11828116
INSDC AEV60077.1
NCBI Locus Tag PSF113_0042
UniParc UPI00023B3A80
UniProtKB Acc G8PX58
UniProtKB ID G8PX58_PSEFL
UniRef100 UniRef100_G8PX58
UniRef50 UniRef50_K9NDK5
UniRef90 UniRef90_G8PX58

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -40.61
Kyte-Doolittle Hydrophobicity Value -0.447
Molecular Weight (kDa) 76335.3
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005027 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0042

Human Homologs

References

No references are associated with this feature.