Pseudomonas fluorescens F113, PSF113_1339

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1339
Name
Replicon chromosome
Genomic location 1563180 - 1563959 (+ strand)

Cross-References

RefSeq YP_005206761.1
GI 378949273
EC Number 1.13.11.3
EC Number 2.8.3.12
EC Number 2.8.3.6
Entrez 11829429
INSDC AEV61366.1
NCBI Locus Tag PSF113_1339
UniParc UPI00023B3D9F
UniProtKB Acc G8PXF6
UniProtKB ID G8PXF6_PSEFL
UniRef100 UniRef100_G8PXF6
UniRef50 UniRef50_G8PXF6
UniRef90 UniRef90_G8PXF6

Product

Feature Type CDS
Coding Frame 1
Product Name
3-oxoadipate CoA-transferase subunit B, Glutaconate CoA-transferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -4.86
Kyte-Doolittle Hydrophobicity Value 0.037
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 5.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 222 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000226 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1339

Human Homologs

References

No references are associated with this feature.