Pseudomonas fluorescens F113, PSF113_3744 (nirN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3744
Name
nirN
Replicon chromosome
Genomic location 4432080 - 4433576 (- strand)

Cross-References

RefSeq YP_005209140.1
GI 378951652
EC Number 1.7.2.1
Entrez 11831839
INSDC AEV63745.1
NCBI Locus Tag PSF113_3744
UniParc UPI00023B44C1
UniProtKB Acc G8QCM7
UniProtKB ID G8QCM7_PSEFL
UniRef100 UniRef100_G8QCM7
UniRef50 UniRef50_F8GTF5
UniRef90 UniRef90_G8QCM7

Product

Feature Type CDS
Coding Frame 1
Product Name
protein NirN
Synonyms
Evidence for Translation
Charge (pH 7) -2.72
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 55149.2
Isoelectric Point (pI) 6.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 68 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3744
Search term: nirN
Search term: protein NirN

Human Homologs

References

No references are associated with this feature.